Guaranteed it's just some dirt in your carbs, mate. The main and/or pilot jets probably need a good clean out, and the carbs could probably do with a good balance and tune at the same time. A flatspot in the rev's range (will be way more noticable in higher gears) is almost always a sign of a bad state of tune. Alternatively, if you've changed air filter (increasing or decreasing airflow through the carbs) or exhaust (increasing or decreasing exhaust flow) in which case you'll need to retune your carbs to suit anyways, possibly even requiring different size jets and needles in your carbs... I discovered this when I overhauled mine during a prolonged stint off the road, and now I give my carbs a good going over at least once every couple of months. Remember, manufacturers spend big money developing motors and bikes, and I personally know that my fuel petcock chamber is tiny, even though my bike happily revs out to 19'000rpm regularly (on the track of course!)
How does the bike run at idle? If you blip the throttle (in neutral) does it react quickly and smoothly? Or does it bog down a little bit before gaining rpm? Or worse still, does it hunt for idle or take it's time finding a nice smooth idle after blipping? All these are signs that a carb tune is needed. I learnt to balance my carbs by sight pretty accurately, then tune them by ear. Not an easy task with a four cylinder, but not impossible. They used to do it everyday back in Grandad's time, the old school way of doing things works!
FYI: I use Shell 95 octane, have found most other companies gas tends to foul plugs and other shit that makes my bike run like crap. Maybe that's just me though.
1990 CBR250RR - fully rebuilt and awesome!
1999 CBR900RR - a work in progress...
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