If something as symmetrical (and light) as a brake rotor causes your wheel to be out of balance something is wrong
Install the wheel and spin it to check for run-out both longitudinal - wobble for and aft if you will, and lateral - side to side. If the rotor is happily concentric then don't worry about re-balancing
If the new rotor wobbles be suspicious of the mounting face of the wheel.
"I don't like it, and I'm sorry I ever had anything to do with it." -- Erwin Schrodinger talking about quantum mechanics.
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