I would pick two 900cc injectors fired alternately and overlapping each other as required when time gets to short for one injector to open-FireFuel-close, move the open-close part and some fueling if needs be to the alternate cycle.
I think for what you are trying to do, EFI will serve you well.
Timing of the injector closing point seems to make a difference to performance too. I aim for injector closing at BDC where the pipe is sucking its hardest. Flettner found aiming for injector closing at transfer closing worked best for him.
This is Flettners two injectors. You can just see the injector nozzles at the back of the "C" port duct of the Kawasaki BigHorn crankcase. They fire horizontally across and above the flywheels. This worked well and looks a bit like the arrangement you have in mind.
I had a lot of success by firing directly across the bottom of the transfers.
But this was not always possible and I tried a lot of different configurations like firing 4 stroke style with the wind going down the inlet tract, and that was the worst.
Nearly anything with two strokes and fuel injection behaves totally different to four strokes. The message is, to avoid disappointment, don't blindly copy any of the methods used with 4T EFI.
"B" port injection against the wind seems to be the best practical arrangement and currently gives very good results.
Anyway for what its worth, that is my take on it.
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